dbfilevalidate - Man Page
insure the source input is a well-formed Fsdb file
Synopsis
dbfilevalidate [-vc]
Description
Validates the input file to make sure it is a well-formed fsdb file. If the file is well-formed, it outputs the whole file and exits with a good exit code. For invalid files, it exits with an error exit code and embedded error messages in the stream as comments with "***" in them.
Currently this program checks for rows with missing or extra columns.
Options
- -v or --errors-only
Output only broken lines, not the whole thing.
- -c or --correct
Correct errors, if possible. Pad out rows with the empty value; truncate rows with extra values. If errors can be corrected the program exits with a good return code.
- -e E or --empty E
give value E as the value for empty (null) records
This module also supports the standard fsdb options:
- -d
Enable debugging output.
- -i or --input InputSource
Read from InputSource, typically a file name, or
-
for standard input, or (if in Perl) a IO::Handle, Fsdb::IO or Fsdb::BoundedQueue objects.- -o or --output OutputDestination
Write to OutputDestination, typically a file name, or
-
for standard output, or (if in Perl) a IO::Handle, Fsdb::IO or Fsdb::BoundedQueue objects.- --autorun or --noautorun
By default, programs process automatically, but Fsdb::Filter objects in Perl do not run until you invoke the run() method. The
--(no)autorun
option controls that behavior within Perl.- --help
Show help.
- --man
Show full manual.
Sample Usage
Input
#fsdb sid cid 1 10 2 1 12 2 12
Command
cat TEST/dbfilevalidate_ex.in | dbvalidate
Output
#fsdb sid cid 1 10 2 # *** line above is missing field cid. 1 12 2 12 # | dbfilevalidate
See Also
Fsdb.
AUTHOR and COPYRIGHT
Copyright (C) 1991-2008 by John Heidemann <johnh@isi.edu>
This program is distributed under terms of the GNU general public license, version 2. See the file COPYING with the distribution for details.